Skip to main content

Oncogenic Signaling Pathways in Mucopolysaccharidoses

  • Conference paper
  • First Online:

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 12558))

Abstract

Cancer cells depend on several signaling pathways and organelles, such as the lysosomes. Defects in the activity of lysosomal hydrolases involved in glycosaminoglycan degradation lead to a group of lysosomal storage diseases called Mucopolysaccharidoses (MPS). In MPS, secondary cell disturbance affects pathways common to cancer. This work aims to identify oncogenic pathways related to cancer in the different MPS datasets available in public databases and compare the ontologies across the different types of MPS. For this, we used 12 expression datasets of 6 types of MPS. Statistical analysis was based on hypergeometric distribution followed by FDR correction. We found several enriched pathways across the 12 MPS studies, among being 57.65% were KEGG pathways, 32.5% of GO Biological Process, 2.5% GO Celular Component, and 7.35% GO Molecular Function. Hippo signaling pathway and MAPK signaling pathway appear in all datasets. Proteoglycans in cancer, Rap1 signaling pathway, and Cytokine-mediated signaling pathway appears in 11 of 12 datasets. The lysosome participates in several biological processes, like autophagy, cell adhesion and migration, and antigen presentation. These processes also may affect in several types of cancer and Lysosomal Storage Diseases. Studying the tumor ontology signature in lysosomal disorders may help understand lysosomal storage diseases and cancer’s underlying mechanisms. This may help amplify therapeutic approaches for both types of diseases.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

References

  1. Cairns, R.A., Harris, I.S., Mak, T.W.: Regulation of cancer cell metabolism. Nat. Rev. Cancer 11(2), 85–95 (2011). https://doi.org/10.1038/nrc2981

    Article  CAS  PubMed  Google Scholar 

  2. Matte, U., Pasqualim, G.: Lysosome: the story beyond the storage. J. Inborn Errors Metab. Screen. 4, e160044 (2016). https://doi.org/10.1177/2326409816679431

    Article  CAS  Google Scholar 

  3. Kallunki, T., Olsen, O.D., Jäättelä, M.: Cancer-associated lysosomal changes: friends or foes? Oncogene 32(16), 1995–2004 (2012). https://doi.org/10.1038/onc.2012.292

    Article  CAS  PubMed  Google Scholar 

  4. Fiorenza, M.T., Moro, E., Erickson, R.P.: The pathogenesis of lysosomal storage disorders: beyond the engorgement of lysosomes to abnormal development and neuroinflammation. Hum. Mol. Genet. 27(R2), R119–R129 (2018). https://doi.org/10.1093/hmg/ddy155

    Article  CAS  PubMed  Google Scholar 

  5. Martinez-Carreres, L., Nasrallah, A., Fajas, L.: Cancer: linking powerhouses to suicidal bags. Front. Oncol. 7, 204 (2017). https://doi.org/10.3389/fonc.2017.00204

    Article  PubMed  PubMed Central  Google Scholar 

  6. Sanchez-Vega, F., et al.: Oncogenic signaling pathways in the cancer genome atlas. Cell 173(2), 321–337 (2018). https://doi.org/10.1016/j.cell.2018.03.035

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Davidson, S.M., Vander Heiden, M.G.: Critical functions of the lysosome in cancer biology. Ann. Rev. Pharmacol. Toxicol. 57(1), 481–507 (2017). https://doi.org/10.1146/annurev-pharmtox-010715-103101

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ursula Matte .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2020 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Silva, G.C.V., Soares, L.D.F., Matte, U. (2020). Oncogenic Signaling Pathways in Mucopolysaccharidoses. In: Setubal, J.C., Silva, W.M. (eds) Advances in Bioinformatics and Computational Biology. BSB 2020. Lecture Notes in Computer Science(), vol 12558. Springer, Cham. https://doi.org/10.1007/978-3-030-65775-8_24

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-65775-8_24

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-65774-1

  • Online ISBN: 978-3-030-65775-8

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics